PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH05480.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family GATA
Protein Properties Length: 241aa    MW: 26051.6 Da    PI: 7.9417
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH05480.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11e-17155185131
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyr 31 
                 C+ Cg+t+Tp+WR+gp g+ktLCnaCG++y 
  PNH05480.1 155 CVECGATTTPQWREGPMGPKTLCNACGVRYV 185
                 *****************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
VKWFERRVNL EPSTKGIEES EREVFELDDT DVNPIGCISG KCRIIKAHNY EEAFSCCGNA  60
AGWFFCRGYF QQSSNSFVPY TPAEMGEDGE PSHRVASQRG GGGAGWANGD SDEEDEEDDS  120
DVPPPNPRRG QGQHHNPPPQ QQPPNKRQKA TGRTCVECGA TTTPQWREGP MGPKTLCNAC  180
GVRYVRSQQK AAGQKRSSGG QKNGQGRPQV RLGADPSSGA ADKPGLKAGH KSKGVPKRAA  240
D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16870.13e-13GATA family protein