PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH05896.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family SBP
Protein Properties Length: 166aa    MW: 18041.2 Da    PI: 4.8425
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH05896.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP30.87.9e-10105134231
                 -SSTT-----TT--HHHHHTT--HHHHT-S CS
         SBP   2 CqvegCeadlseakeyhrrhkvCevhskap 31 
                 Cqv gC + l+ +k y+ rh+vCe hsk +
  PNH05896.1 105 CQVAGCGQSLEGMKGYFLRHRVCEEHSKRK 134
                 ***************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MDGDLHVGEL WDLDTQHTEL GWTLAGYRWD PVGLVATKRT AEAAALQVNL ERFSGGDSGG  60
THEHYDPGME LEPHEDGDNS CLDPDVLAAA PVYLPQPAGC KSLLCQVAGC GQSLEGMKGY  120
FLRHRVCEEH SKRKRKAQPP HRMVFLDPDG GGDAFLPAAP FFVSLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69170.12e-06SBP family protein