PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH06247.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family C3H
Protein Properties Length: 198aa    MW: 22402.2 Da    PI: 7.6223
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH06247.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH40.54.4e-134772126
                --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                y    C+++ +tG+C+yGd CkF+H+
  PNH06247.1 47 YQPDVCKDYKETGYCSYGDACKFMHD 72
                66789********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MYKGTNAYID YRKGFRREHT VAAEKGTGSH GPLRGSAYMR VTARFDYQPD VCKDYKETGY  60
CSYGDACKFM HDRGDYKSGW ELDKMWEEEQ KKKADALARG WNPDEEEGEG AGGAVPEEED  120
ELPFACFICR ERWEDCKTPP VVTRCKHYFC EKCALKASSK ANKCAVCGQS TQGIFNVAHD  180
VLKRQRLAAA AEAAKHKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01350.11e-74C3H family protein