PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH06274.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family MYB
Protein Properties Length: 111aa    MW: 12560.4 Da    PI: 10.0247
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH06274.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.62.9e-18753148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     r +WT+eEd ll+++v +lG g W++ ar+++ gRt+ qc  rw+ +l
       PNH06274.1  7 REKWTPEEDSLLIKLVGELGAGKWASLARHLP-GRTDQQCMGRWRRHL 53
                     789*****************************.************986 PP
2Myb_DNA-binding44.43.7e-1459100144
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                      +++W++eEd ll  +++++G   W++Ia+ +  +Rt+ qc+ rw
       PNH06274.1  59 KDAWSAEEDSLLQALHQKHGAC-WSLIAKALA-HRTPQQCRGRW 100
                      689*****************99.*********.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
VNPNICREKW TPEEDSLLIK LVGELGAGKW ASLARHLPGR TDQQCMGRWR RHLDPSIRKD  60
AWSAEEDSLL QALHQKHGAC WSLIAKALAH RTPQQCRGRW CILTGAGKSK Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02320.21e-26MYB family protein