PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH06532.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family AP2
Protein Properties Length: 126aa    MW: 13383.7 Da    PI: 9.6307
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH06532.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2431.2e-133786155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                s+++GV+w++k++rW A I         k+++lg+f  + +Aa+a ++a+ kl+g
  PNH06532.1 37 SKFRGVCWNRKNKRWQAAINTG-----GKYVYLGSFTAEHDAARAFDNAAIKLRG 86
                79****************8883.....4**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MRSRATAPDD EYEVGTSGGD DEGGGTQRNG EQRALSSKFR GVCWNRKNKR WQAAINTGGK  60
YVYLGSFTAE HDAARAFDNA AIKLRGSKGT AGAEARGGFR AAHQLQLPEL VQQLQEAAAG  120
MQPGGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G39250.11e-09AP2 family protein