PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH08582.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

ARR-B

Protein Properties

Length: 559aa MW: 58181.9 Da PI: 4.8374

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH08582.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.6	1.2e-27	222	275	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ e+H++Fv+av+ L G++kA+Pk+ile+m+v+gLt+e+v+SHLQkYRl PNH08582.1 222 KARVVWSVEMHQQFVNAVNLL-GIDKAVPKKILEIMNVDGLTRENVASHLQKYRL 275 68*****************.******************************8 PP
2	Myb_DNA-binding	31.9	3e-10	224	274	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e ++++v+av++lG + +k+I + m+ g+t++++ s++qky+ PNH08582.1 224 RVVWSVEMHQQFVNAVNLLGIDkaVPKKILEIMNvDGLTRENVASHLQKYR 274 678***********************************************7 PP
3	Response_reg	81.6	2.5e-27	27	135	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 +l+vdD+pl +++ +q+l+k y ev++++++++al+ll+ek+ +Dl+l D+ mp+mdG++ll+ e +lp+i+++++g+ + +l+ + Ga PNH08582.1 27 LLVVDDDPLCLKVTEQMLRKCSY-EVTTCTNATSALALLREKNmdYDLVLSDVYMPDMDGFKLLEVVGL-ELDLPVIMMSSNGDTSNVLRGVTHGAC 121 599******************.***********777777***************99844.347******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ eel++ PNH08582.1 122 DYLIKPVRLEELRN 135 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MEGFVVKLEE QGTGALGQGR FPAGLRLLVV DDDPLCLKVT EQMLRKCSYE VTTCTNATSA 60 LALLREKNMD YDLVLSDVYM PDMDGFKLLE VVGLELDLPV IMMSSNGDTS NVLRGVTHGA 120 CDYLIKPVRL EELRNLWQHV IRRRRQHNMD VDSDEQSQER DDDMGRNKRK AEAAGCDQAQ 180 FNGAAAAAAG AAALGAAGMM ASLGMGMGVA DELGLDNGSN KKARVVWSVE MHQQFVNAVN 240 LLGIDKAVPK KILEIMNVDG LTRENVASHL QKYRLYLKRV SSVQPSGHRA PKTSPPPPPL 300 PQLGSFGGAP PSPPLVPALV SQQALPPVSL QPVPQPLGQA QTTASDSGAA QGPAGQSSAA 360 QPGLLGDGAG ALSSASQQQH SLQQLQPAHL GLAQPHLSQP ITPEPAGQPM MQQPPIAAAI 420 GCDLHAAQHI PHSSAPGMGS PQQHLHAPGG MGSGAVQHSA GDVAMGLSPD LLGGLMDEGG 480 YGAGDGIVPH GALPGLDPAM LDDSDIAAVF NEMYGTVGSG PVDEVAVGGA GLGAGLDSSG 540 VDPMGKVTDD DFFSFLLKN

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MEGFVVKLEE QGTGALGQGR FPAGLRLLVV DDDPLCLKVT EQMLRKCSYE VTTCTNATSA  60
LALLREKNMD YDLVLSDVYM PDMDGFKLLE VVGLELDLPV IMMSSNGDTS NVLRGVTHGA  120
CDYLIKPVRL EELRNLWQHV IRRRRQHNMD VDSDEQSQER DDDMGRNKRK AEAAGCDQAQ  180
FNGAAAAAAG AAALGAAGMM ASLGMGMGVA DELGLDNGSN KKARVVWSVE MHQQFVNAVN  240
LLGIDKAVPK KILEIMNVDG LTRENVASHL QKYRLYLKRV SSVQPSGHRA PKTSPPPPPL  300
PQLGSFGGAP PSPPLVPALV SQQALPPVSL QPVPQPLGQA QTTASDSGAA QGPAGQSSAA  360
QPGLLGDGAG ALSSASQQQH SLQQLQPAHL GLAQPHLSQP ITPEPAGQPM MQQPPIAAAI  420
GCDLHAAQHI PHSSAPGMGS PQQHLHAPGG MGSGAVQHSA GDVAMGLSPD LLGGLMDEGG  480
YGAGDGIVPH GALPGLDPAM LDDSDIAAVF NEMYGTVGSG PVDEVAVGGA GLGAGLDSSG  540
VDPMGKVTDD DFFSFLLKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	142	170	RRRRQHNMDVDSDEQSQERDDDMGRNKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	3e-85	ARR-B family protein