PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH08957.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family bHLH
Protein Properties Length: 346aa    MW: 36292.3 Da    PI: 8.1323
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH08957.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.7e-1171117453
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                 ++  rE+ RR+++N++f  L +l+ +    + +K +K++iL+ A++++++
  PNH08957.1  71 KKACREKARREKLNERFLDLARLIDPG---SEPKTDKSTILTDAIKHVQQ 117
                 5678**********************8...8****************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MDPATLEAVC QVASGRRYAA DAGPGLLMAP GAGLGLGKRV LDDSDSDDDE KVSGKRSKGE  60
SKGELSAAAT KKACREKARR EKLNERFLDL ARLIDPGSEP KTDKSTILTD AIKHVQQTTV  120
ENHQLKQLNK FLEERVSTLE RERGLQLYQQ SLMMQGMGQA QMMQPAQAMM VGGATGMPHM  180
AGVPMCHPQM AMHSGNMGPA GAGLLSAANS GLPSGPTPPL PSLQQQHQQQ AHQQQQHQQQ  240
AHQQQHQQQV QAGMMGQAAG GMLQQALMPQ LQMVSTASIG AGVGVGSAAA AAGVTFNGLG  300
GGGGAGPSKP SVVTGMPGAM PYQGMYWLPS QMMDSTQDSL LRPPAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23210.12e-11bHLH family protein