PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH08993.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family Nin-like
Protein Properties Length: 492aa    MW: 50597.8 Da    PI: 7.0345
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH08993.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK49.67.9e-16356402652
      RWP-RK   6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 s++ +++ F+lp+ dAA+ Lg++ + +Kr CR +G +RWP+Rk++sl
  PNH08993.1 356 SFDAVRATFDLPLSDAARALGLSESEVKRLCRVHGAERWPQRKLASL 402
                 788999**************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    
MNAYPCLSSL GYELYEPPSL QPLRSAEPMS ATRRSQPLLH ATDASMLGHQ MPASSARSCT  60
LTREASDVHA AASCMLPFGS APLGARGGLA GGAQAAVSLS SSLSRLSMPQ PSSRSPQQPW  120
GAAPSGAAPW SWQPSGAGAS PPLSLLLPPA HLPSQPAPSV QQAPSPRAPD FTASINSIGA  180
SCLLSGGSED DGWSTDGRAL TMEHLAAEIE RAPWPAYPSA SAAAAAAPAA DASGCRPRAT  240
MRAAAGGSAL FEATTAAWAA AQIVSVTPLA VGALHPAGTA CTVWDPCTTW PPVGAPDSRT  300
WSMSNSQLQR QGEAMEEADA GYDSAWDGEM EDRSATVASG GGASGGGPAS MAAAASFDAV  360
RATFDLPLSD AARALGLSES EVKRLCRVHG AERWPQRKLA SLRRVAEAVE ADKALPVQER  420
QAMLAAVQRN RDAILADANT PLQPALVLAR QSHYRRIFGG RAKAKQQQAV AALQQVHSSA  480
VHSSGGGMML LL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.13e-08Nin-like family protein