PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH09268.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family SBP
Protein Properties Length: 91aa    MW: 9790.39 Da    PI: 10.6343
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH09268.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP27.77.2e-099384574
                TTSSEEETTT--SS--S-STTTT------- CS
         SBP 45 qCsrfhelsefDeekrsCrrrLakhnerrr 74
                qC++fh + efD + r Cr+ L     +rr
  PNH09268.1  9 QCGKFHLVAEFDGGNRNCRKALMIRFYKRR 38
                9********************987766666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MYLSCTALQC GKFHLVAEFD GGNRNCRKAL MIRFYKRRNL PLGHAGSIMA CSIQHHGVQG  60
PHLGGPPSTP PAPSVSAAQL YGVRKRAFPS G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18830.23e-07SBP family protein