PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH10560.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family C3H
Protein Properties Length: 181aa    MW: 19308.1 Da    PI: 8.4659
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH10560.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH35.31.9e-114265226
                -S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                kt+ C +++  G C++G+rC+FaHg
  PNH10560.1 42 KTKVCTRWLM-GDCRFGARCNFAHG 65
                89********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MDGAFPNRRG PNEPFPQQQG EGGGPEGGPK PRGFRGTAEN AKTKVCTRWL MGDCRFGARC  60
NFAHGDTELR KLPDRPGGRG AGRGGFGQFP GSGRGGYGGR GPGGFQGPGY EAVGYEAVGY  120
GQPQGGPSED VWAAQGFPVQ GPNGWVMYRT RDTGEPYYHN HHNNETSWDR PGDWPIGAPT  180
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12130.17e-09C3H family protein