PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH10932.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

CPP

Protein Properties

Length: 1059aa MW: 107167 Da PI: 6.6957

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH10932.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.4	3.3e-14	48	83	3	39
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 +k+CnCkk +Clk+YC Cfaag++Cs+ C C +C N+ PNH10932.1 48 SKRCNCKKARCLKLYCVCFAAGVYCSS-CACVECLNT 83 699**********************.******7 PP
2	TCR	46.3	8.7e-15	118	156	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +kkgC+C++s+C+kkYCeC+ a+++C+ C+Ce C+N PNH10932.1 118 HKKGCRCRRSRCIKKYCECYDAQVFCNAACRCEACRNMP 156 89***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 1059 aa Download sequence
MKKSKRGHDS GLESTGAAAA AVPYMLEGAY GGGADEDYQE DAAPAAGSKR CNCKKARCLK 60 LYCVCFAAGV YCSSCACVEC LNTLGTQELV LKERNKKLQQ SPWAFAPKVE QKEGELAHKK 120 GCRCRRSRCI KKYCECYDAQ VFCNAACRCE ACRNMPEGGI AAPHAIPHIA AQQQQQLQLP 180 PSRAQQQLPH SRAPSANAAA LFGAPAQPAG LGLGPMAGAT FGDGLVKRAS YGTAQLSYGP 240 GQLPYRAAQL PYDVRAEDLE AALARQRTVA AQADSGPSGS SGGGAGGAGE PPPRAAGRGG 300 PPLGPGRSSV VAAMGAGYGD SLEVLDAAQE AGLGVRGRGR NQQVRGLGPD AGRLPGASDG 360 FHPPQHAPGG AADKHCDGGP LYDNPALLYD NPAPMHGNGG GSLYGNGGGP PHGNGGRPLH 420 GDRLEPAVGP SYGMPTAFMS MDAIAAAAQA ASAATASGLR GQHLGARAEP LPPPASGGLA 480 APGAGGDIPA AGGSVAAAFG GASFGGDEMA RAAGGMALEQ QGEGASGRVE RERVARRSSS 540 DPEEDAAVAA AQRGAPASVP CPPADDLPGA ATGGVATAGE HLPPEGFDPL RRADRAAAGV 600 AVGVMAPGAV GAAGLRGPPA LGIAAGGTAA AAAEAAAAAR QGPQQPTAGR LDPLPAALGA 660 DGGLSQYGSG ELSYGGDDGE DHSALVDAVL QAPGLLLQDP ERAEQLAVWL GLDVPQQLAA 720 RKAAQILTAL LQMAGAAAAA RPAQGIAPGG SKWCGRRPPT MQPAPAPLVQ QTSRTLHHPP 780 TAAPEPHSRD PASQGHELVL LHALFGGRRA VVGLDLSHGM ISLAERAIQA YRQQQQLLGQ 840 QAQARPAGAG PSLAPLDAVV ADASCLDGRG PAAVVMSVFG LQQMGSAAPQ ALASWARALA 900 PGGVCVVVLW PPRVEAAGPW TAYEQVDRLQ RHKMEWESLD QFWQVMTEGG PWRARRLAQG 960 DAAMADLRAR FAAKYDALVA EYDGAGAEQG GSGRVEEGQG QLDGRPDGDV MQDALLEITG 1020 GRSVPRVFIN GSFFGGGDDT AAAASNGKLQ KLLTEAGAL

Sequence ? help Back to Top

Protein Sequence Length: 1059 aa Download sequence

MKKSKRGHDS GLESTGAAAA AVPYMLEGAY GGGADEDYQE DAAPAAGSKR CNCKKARCLK  60
LYCVCFAAGV YCSSCACVEC LNTLGTQELV LKERNKKLQQ SPWAFAPKVE QKEGELAHKK  120
GCRCRRSRCI KKYCECYDAQ VFCNAACRCE ACRNMPEGGI AAPHAIPHIA AQQQQQLQLP  180
PSRAQQQLPH SRAPSANAAA LFGAPAQPAG LGLGPMAGAT FGDGLVKRAS YGTAQLSYGP  240
GQLPYRAAQL PYDVRAEDLE AALARQRTVA AQADSGPSGS SGGGAGGAGE PPPRAAGRGG  300
PPLGPGRSSV VAAMGAGYGD SLEVLDAAQE AGLGVRGRGR NQQVRGLGPD AGRLPGASDG  360
FHPPQHAPGG AADKHCDGGP LYDNPALLYD NPAPMHGNGG GSLYGNGGGP PHGNGGRPLH  420
GDRLEPAVGP SYGMPTAFMS MDAIAAAAQA ASAATASGLR GQHLGARAEP LPPPASGGLA  480
APGAGGDIPA AGGSVAAAFG GASFGGDEMA RAAGGMALEQ QGEGASGRVE RERVARRSSS  540
DPEEDAAVAA AQRGAPASVP CPPADDLPGA ATGGVATAGE HLPPEGFDPL RRADRAAAGV  600
AVGVMAPGAV GAAGLRGPPA LGIAAGGTAA AAAEAAAAAR QGPQQPTAGR LDPLPAALGA  660
DGGLSQYGSG ELSYGGDDGE DHSALVDAVL QAPGLLLQDP ERAEQLAVWL GLDVPQQLAA  720
RKAAQILTAL LQMAGAAAAA RPAQGIAPGG SKWCGRRPPT MQPAPAPLVQ QTSRTLHHPP  780
TAAPEPHSRD PASQGHELVL LHALFGGRRA VVGLDLSHGM ISLAERAIQA YRQQQQLLGQ  840
QAQARPAGAG PSLAPLDAVV ADASCLDGRG PAAVVMSVFG LQQMGSAAPQ ALASWARALA  900
PGGVCVVVLW PPRVEAAGPW TAYEQVDRLQ RHKMEWESLD QFWQVMTEGG PWRARRLAQG  960
DAAMADLRAR FAAKYDALVA EYDGAGAEQG GSGRVEEGQG QLDGRPDGDV MQDALLEITG  1020
GRSVPRVFIN GSFFGGGDDT AAAASNGKLQ KLLTEAGAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-26	CPP family protein