PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH12571.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family Nin-like
Protein Properties Length: 150aa    MW: 17349.3 Da    PI: 9.9534
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH12571.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK52.59.7e-174895350
      RWP-RK  3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50
                 +++l ++++ F++p++ A+ +Lg++   L   CR +GI+RWP Rk+ 
  PNH12571.1 48 PKLTLRMVQSTFHMPMETASETLGISHRQLRDVCRLHGIERWPKRKLD 95
                589*******************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MAGHDELVDL YIRWGGALIH DSQMHLQELE ETQEFPKKPK KTKKTKKPKL TLRMVQSTFH  60
MPMETASETL GISHRQLRDV CRLHGIERWP KRKLDCLDTM ATVLTNMVEQ VAVSANRDAI  120
MADPNTAIDP YLFRMYTCGK KSLHRQKMKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.16e-08Nin-like family protein