PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON31239.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 45aa    MW: 5143.94 Da    PI: 10.2931
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON31239.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.22.5e-101542128
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIa 28
                     +g W++eEd++l ++v ++G g+W++++
       PON31239.1 15 KGLWSPEEDLRLRNYVLKHGHGCWSSVP 42
                     688**********************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 45 aa     Download sequence    
MGCKSSDKPK PKHRKGLWSP EEDLRLRNYV LKHGHGCWSS VPINA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48920.13e-15MYB family protein