PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON31402.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 81aa    MW: 9268.17 Da    PI: 5.134
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON31402.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.41e-103171345
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      ++++E+ l ++  ++ G + W++Ia +++ gRt++q+  +w 
       PON31402.1 31 QFSEDEETLAIKMYNLVGER-WSLIAGRIP-GRTAEQVEKYWK 71
                     69******************.*********.***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
MAHSRHSSSG DNFAHSPEIN SEEPRNEVEV QFSEDEETLA IKMYNLVGER WSLIAGRIPG  60
RTAEQVEKYW KSRNSTCKSD L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01380.13e-17MYB_related family protein