PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON31969.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 252aa    MW: 28563.7 Da    PI: 5.5765
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON31969.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.41.4e-172267148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg ++++E+e ++ ++++lG++ W+ Ia++++ gRt++++k++w++yl
       PON31969.1 22 RGTFSKQEEETILTLHHMLGNK-WSQIAQHLP-GRTDNEIKNYWHSYL 67
                     899*******************.*********.************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
LQRNGKSCRL RWINYLRPGL KRGTFSKQEE ETILTLHHML GNKWSQIAQH LPGRTDNEIK  60
NYWHSYLKKK VAKAEEEMVT DQTKTQCTTS SSESSPSSEK NSNRIPSYES LDQMEKSLST  120
TDQSVNPNPY NLSRDQQPKS SLPRILFAEW LSVDQVNGPD SVNMVQPVVP RETFGHTLNF  180
QDSMGHGILL NEGLFGGDFQ NGLSQVSDCD VLNSEFKFED QISGSGFVDF ISGSDVSIHD  240
FNMHSDVMYT FN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52260.14e-36MYB family protein