PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON31971.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB
Protein Properties Length: 299aa    MW: 33990.1 Da    PI: 7.1094
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON31971.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.43.4e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++lv+++k +G gtW + +++ g+ R++k+c++rw +yl
       PON31971.1 14 KGAWTQEEDQILVRYIKNHGHGTWGSLPKHAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding50.54.8e-1667110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++++eE+  +v+++ ++G++ W+ Ia+ ++ gRt++++k++w++
       PON31971.1  67 RGPFSEEEENTIVQLHGMFGNR-WAVIASQLP-GRTDNEIKNYWNT 110
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MGRRPCCDKN GVRKGAWTQE EDQILVRYIK NHGHGTWGSL PKHAGLLRCG KSCRLRWTNY  60
LRPGIKRGPF SEEEENTIVQ LHGMFGNRWA VIASQLPGRT DNEIKNYWNT RLKKHFLADK  120
HQENLPLSLS DPPGYMKSQS SPVTRHMKQW ESARIEAELR LSTESSLIDS LPNPNADHFL  180
HLWNSEIGKS FHQIKPKDGS PVSQRYSYAK FESSSSVPMQ ASNMKETHST SIMVQEQEDG  240
YKPMADSDSS SLYELSDLST AVSDLLLDFP VGYDLDFLNG NEDGFTISLD RKPDNTLLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.14e-90MYB family protein