PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON32017.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 237aa MW: 27194.7 Da PI: 9.916

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON32017.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.5	2.3e-16	14	60	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + W +eEd++l+++v+ +G g+W+t++++ g++R +k+c++rw +yl PON32017.1 14 NLWKPEEDLILKKYVEAHGEGNWATVSQKSGLKRGGKSCRLRWKNYL 60 56***************************99**********97 PP
2	Myb_DNA-binding	56.4	6.8e-18	66	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgr+++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l PON32017.1 66 RGRMSQEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 111 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MENNRVKKQP PKKNLWKPEE DLILKKYVEA HGEGNWATVS QKSGLKRGGK SCRLRWKNYL 60 RPNIKRGRMS QEEEDLIIRM HKLLGNRWSL IAGRLPGRTD NEVKNYWNTH LNKISPLGKR 120 KHVDSNDQNN TNSTETTNKK SKIHTYPVIS IDAQKNPTKE SNGKKEEGST SLLNPLMTDT 180 KSFSYDTESP FIATNTSTFF FDDEPLITYM DSFALFEGFG YTTGENYAEL GMQLVSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	2e-66	MYB family protein