PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON32169.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 243aa MW: 26899.9 Da PI: 8.217

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON32169.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.7	1.5e-19	42	87	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+teEd +l ++v+q+G+++W++I+r++ gR++k+c++rw + PON32169.1 42 KGPWSTEEDRILTRLVEQYGPRNWSLISRYIK-GRSGKSCRLRWCNQ 87 79***************************9.*********985 PP
2	Myb_DNA-binding	54.1	3.6e-17	96	138	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ede ++ a++++G++ W+tIar ++ gRt++ +k++w++ PON32169.1 96 PFSAAEDETILAAHARYGNR-WATIARLLP-GRTDNAVKNHWNST 138 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MEQMNHNRCS STTTSSSDSS SSESSGNDIK VPRSGTKPER IKGPWSTEED RILTRLVEQY 60 GPRNWSLISR YIKGRSGKSC RLRWCNQLSP SVEHRPFSAA EDETILAAHA RYGNRWATIA 120 RLLPGRTDNA VKNHWNSTLK RRVREQLMGM EEMDGSACRT AAFGGGPAGS VPCGINNDSN 180 INNGSPPLSL EDDPLTALTL APPGIGGETV EGRRTESFPA GFWDVMRDVI AREVREYVNS 240 EFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	8e-58	MYB family protein