PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON32251.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family HD-ZIP
Protein Properties Length: 765aa    MW: 84351.4 Da    PI: 5.8057
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON32251.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.22.2e-21111166156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 r+k +++t+eq++e+e+lF+++++p++++r++L+k+lgL  rqVk+WFqNrR++ k
  PON32251.1 111 RKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 166
                 7999************************************************9877 PP
2START232.11.5e-722825033206
                 HHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECTT CS
       START   3 aeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevissg 88 
                  ++ ++el+k+a+a+ep+W +s+    e++n+de+l++f+ ++      +s+ea+r++gvv+ +l +lv++++d++ qW+e+++    ka+t++vis+g
  PON32251.1 282 VNQSMEELIKMATAGEPLWIRSVetgrEILNYDEYLKEFAVENPtkgpkRSIEASREVGVVFVDLSRLVQSFVDVN-QWKEMFPfmisKAATVDVISNG 379
                 57889**********************************88887999*****************************.********************** PP

                 ......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHH CS
       START  89 ......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwl 180
                       ga+qlm+aelq+l+p+vp R+++fvRy++ql+a++w++vdvS+d  +++  ++s+v+++++pSg++ie+ksngh+kvtwveh +++++++h +
  PON32251.1 380 egdnknGAVQLMFAELQMLTPMVPtREVYFVRYCKQLNAEQWAVVDVSIDKVEENI-DASLVKCRKRPSGCIIEDKSNGHCKVTWVEHLECQKSTVHTM 477
                 ******************************************************98.9***************************************** PP

                 HHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 181 lrslvksglaegaktwvatlqrqcek 206
                 +r +v+sgla+ga++w+atlq qce+
  PON32251.1 478 YRTIVNSGLAFGARHWMATLQLQCER 503
                 ************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 765 aa     Download sequence    
MGVDMSNTPP NSRTKDYFAS PALSLSLAGI FRDAGKAAAA AAAAVNTEVE EGDEGSSGGG  60
GGGGGSGRKD DTALEISSEN SGPARSRSDD DFEAEGEEDD GDGDKSKKKK RKKYHRHTAE  120
QIREMEALFK ESPHPDEKQR QQLSKQLGLA PRQVKFWFQN RRTQIKAIQE RHENSLLKSE  180
IDRLRDENKA LREQINKSCC PNCGTATVSK DPTITTEEQQ LRIENAKLKA EVEKLKATIR  240
KYPPGTASPS SSSVGNDQET RSSLEFYTGI FGLEKSRIME IVNQSMEELI KMATAGEPLW  300
IRSVETGREI LNYDEYLKEF AVENPTKGPK RSIEASREVG VVFVDLSRLV QSFVDVNQWK  360
EMFPFMISKA ATVDVISNGE GDNKNGAVQL MFAELQMLTP MVPTREVYFV RYCKQLNAEQ  420
WAVVDVSIDK VEENIDASLV KCRKRPSGCI IEDKSNGHCK VTWVEHLECQ KSTVHTMYRT  480
IVNSGLAFGA RHWMATLQLQ CERLVFFMAT NVPMKDSSGV ATLAGRKSIL KLAQRMTWSF  540
CRAIAASSYN TWTKVSSKTG EDIRIASRKN LNDPGEPLGV ILCAVSSVWL PVCPHVLFDF  600
LRDETHRNEW DIITSGGSVE STMANLAKGQ DRGNAVSIQT VNSKENSMWI LQDCCTNAYE  660
STVVYAPVDI AGMQSVMTGC DSSNLAVLPS GFSILPDGIE SRPLVITSRP EEKNSEGGSL  720
LTVAFQILTN SSPAAKLTME SVDSVNTLIS CTLKNIKTCL QCEEG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107112KKKKRK
2107113KKKKRKK
3109113KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein