PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON32254.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 448aa MW: 49835.3 Da PI: 5.6048

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON32254.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.6	2.7e-33	225	279	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWt+eLHe+Fveav+ LGGse+AtPk il+lmkv+gLt++hvkSHLQkYR+ PON32254.1 225 KPRMRWTQELHEAFVEAVNMLGGSERATPKGILNLMKVPGLTIYHVKSHLQKYRT 279 79****************************************************8 PP
2	Myb_DNA-binding	54.9	2e-17	227	278	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k I + m g+t +++ks++qky+ PON32254.1 227 RMRWTQELHEAFVEAVNMLGGSeraTPKGILNLMKvPGLTIYHVKSHLQKYR 278 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MSLSFPVGST PIEDKYSKLP DTFQVSPQRK MMINSSTRQA SPLSSSAGSG GHLFSPSSRV 60 LSDVPISSVS PHERHSLYSP VISQSSGGMP PIHSSLSEVQ STEFIGHIEE NKDISWCPDS 120 IQDLLDFSGI VQNDQVESSA VVVTSEAHNE KTDWPDWPVI SIGEDLGQFW PDLPVNDNTT 180 DSKPEVLKQS VDTSVQQIQN YQHRPFQSGE QSTIPDPLST ASSTKPRMRW TQELHEAFVE 240 AVNMLGGSER ATPKGILNLM KVPGLTIYHV KSHLQKYRTA RYKPESSEGL SEKKSSPAED 300 VRSKELNTSI GITEALRLQV ELQKRLHEQL ENQRKLQLQI EEQGKYLEKM FDQHKKMENK 360 FKASSSNSND TDDRLSNMHQ PSENEKSEIS EQAPPSKGIG SSKANSILEK SFIDPSEKQE 420 AHETKTCKEH EPGEGESDVP TTKRARSG

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MSLSFPVGST PIEDKYSKLP DTFQVSPQRK MMINSSTRQA SPLSSSAGSG GHLFSPSSRV  60
LSDVPISSVS PHERHSLYSP VISQSSGGMP PIHSSLSEVQ STEFIGHIEE NKDISWCPDS  120
IQDLLDFSGI VQNDQVESSA VVVTSEAHNE KTDWPDWPVI SIGEDLGQFW PDLPVNDNTT  180
DSKPEVLKQS VDTSVQQIQN YQHRPFQSGE QSTIPDPLST ASSTKPRMRW TQELHEAFVE  240
AVNMLGGSER ATPKGILNLM KVPGLTIYHV KSHLQKYRTA RYKPESSEGL SEKKSSPAED  300
VRSKELNTSI GITEALRLQV ELQKRLHEQL ENQRKLQLQI EEQGKYLEKM FDQHKKMENK  360
FKASSSNSND TDDRLSNMHQ PSENEKSEIS EQAPPSKGIG SSKANSILEK SFIDPSEKQE  420
AHETKTCKEH EPGEGESDVP TTKRARSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04450.2	2e-64	G2-like family protein