PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON32760.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 472aa    MW: 53092 Da    PI: 6.2043
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON32760.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS464.27.6e-142474691374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lLl+cA++v+sg+le+a+ +L+++ +laspdgd+mqR+aayfteALa r+++s+++l kal++++ s    s+e+ ++klf+e++P+lk++++++N
  PON32760.1  47 LIHLLLTCANHVASGSLENANIALEQITHLASPDGDTMQRIAAYFTEALADRILKSWPGLHKALNSTRIS--LISDEILVRKLFFELFPFLKVAFVLTN 143
                 689*************************************************************999987..79************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaI ea+ege++vHiiD+ +s+++QW+aLlq L++R+egpp+lRiT+v++    +ke le++++rL++ Ae+l++pf+fn+ + ++le+l++e+Lrvk+
  PON32760.1 144 QAITEAIEGEKMVHIIDLHASEPAQWVALLQVLSARTEGPPHLRITAVHQ----QKEVLEQMAHRLTEEAEKLDIPFQFNP-IISKLENLDMEKLRVKT 237
                 **************************************************....9**************************.7999************* PP

        GRAS 199 gEalaVnlvlqlhrll......................................................desvsles..erdevLklvkslsPkvvvv 241
                 gEal+V++vlqlh+ll                                                      ++++sl+s  + d++L+++++l Pk++vv
  PON32760.1 238 GEALVVSSVLQLHSLLasddellrkksplgpknlngthfpralqmsqstlgellekdlvngyspspdsasSSPLSLNSsaKMDSFLNALWGLTPKLMVV 336
                 ********************************************************************9966666666667899*************** PP

        GRAS 242 veqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqakll 340
                 +eq+++hn+++++er+leal+ y+alfd+le++++r+  er kvE++l+g+ei+n++acegaer+erhe+l kW +rl++aGF ++pls++ ++qa++l
  PON32760.1 337 TEQDSNHNGSTLMERLLEALYSYAALFDCLESTVSRTPLERLKVEKMLFGEEIKNIIACEGAERKERHEKLDKWIQRLDSAGFVNIPLSYYGMMQARRL 435
                 *************************************************************************************************** PP

        GRAS 341 lrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 l+ ++ dgy++ ee++ ++++W+drpL+s+SaWr
  PON32760.1 436 LQGYGCDGYKIREENANVLIYWQDRPLYSISAWR 469
                 *********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
MAFQDEGSSS VTSSSLQFFS MMSLSPSLGT PYPWLKELKS EERGLYLIHL LLTCANHVAS  60
GSLENANIAL EQITHLASPD GDTMQRIAAY FTEALADRIL KSWPGLHKAL NSTRISLISD  120
EILVRKLFFE LFPFLKVAFV LTNQAITEAI EGEKMVHIID LHASEPAQWV ALLQVLSART  180
EGPPHLRITA VHQQKEVLEQ MAHRLTEEAE KLDIPFQFNP IISKLENLDM EKLRVKTGEA  240
LVVSSVLQLH SLLASDDELL RKKSPLGPKN LNGTHFPRAL QMSQSTLGEL LEKDLVNGYS  300
PSPDSASSSP LSLNSSAKMD SFLNALWGLT PKLMVVTEQD SNHNGSTLME RLLEALYSYA  360
ALFDCLESTV SRTPLERLKV EKMLFGEEIK NIIACEGAER KERHEKLDKW IQRLDSAGFV  420
NIPLSYYGMM QARRLLQGYG CDGYKIREEN ANVLIYWQDR PLYSISAWRC RK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein