PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON32793.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MIKC_MADS

Protein Properties

Length: 142aa MW: 16390.8 Da PI: 10.0234

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON32793.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	100.6	6.1e-32	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaev++iifs++gklye++s PON32793.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIIFSNRGKLYEFCS 59 79***********************************************96 PP
2	K-box	75.6	1.4e-25	82	142	9	69
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 + ++++s++qe+ kLk+++e Lqr+qR+llGedL++L+ keL+qLe+qLe+sl++iRs+K PON32793.1 82 QPVNDSQSSYQEYLKLKARVEVLQRSQRNLLGEDLGPLNSKELEQLENQLETSLRHIRSTK 142 4556789****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVSLIIFSN RGKLYEFCSG 60 SSMLKTLEKY QKYSYGALEA SQPVNDSQSS YQEYLKLKAR VEVLQRSQRN LLGEDLGPLN 120 SKELEQLENQ LETSLRHIRS TK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15800.1	8e-77	MIKC_MADS family protein