PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON32944.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NF-YB

Protein Properties

Length: 215aa MW: 23681.1 Da PI: 5.0773

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON32944.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	169.7	3.5e-53	46	142	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 vreqd+++Pianv+rim+++lP++akis+daket+qecvse+isf+t+ea+d+cqre+rkt++++d+lwa+a+lGf+dyvepl+++l++yre e+++ PON32944.1 46 VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANDRCQREQRKTVTAEDVLWAMAKLGFDDYVEPLTLFLTRYRESETDR 142 69********************************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MCTYYISAAL GIVVANNNNS NNNTNDNNAG SDGENARERV RGACVVREQD QYMPIANVIR 60 IMRRILPSHA KISDDAKETI QECVSEYISF ITGEANDRCQ REQRKTVTAE DVLWAMAKLG 120 FDDYVEPLTL FLTRYRESET DRTSLRSDPF VKRSSTSDQY GHPGPYGPAF QLGPYPPGMF 180 DATGGYFRDG SGPTGGGSSS QSGGLGSYDP FGHYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21970.1	8e-66	NF-YB family protein