PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON32955.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NF-YB

Protein Properties

Length: 217aa MW: 22233.5 Da PI: 6.6302

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON32955.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	181.9	5.4e-57	24	119	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 reqdr+lPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplk+yl+++re+egek PON32955.1 24 REQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQRFRETEGEK 119 89********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MADSDNDSGG HNGGTNANSE LSPREQDRLL PIANVSRIMK KALPANAKIS KDAKETVQEC 60 VSEFISFITG EASDKCQREK RKTINGDDLL WAMTTLGFEE YVEPLKIYLQ RFRETEGEKG 120 ASTVVREKDA VGGSVGNGGG GGGYGDGSSG GGGGGGGGVY GSGMGMVLMG QQHHHGHVYG 180 SGGFHLMATN SGGGGIGLGS KTGPSHLSPG SNFGRPG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	1e-65	NF-YB family protein