PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON33078.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family NAC
Protein Properties Length: 187aa    MW: 21751.8 Da    PI: 7.689
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON33078.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM37.76.1e-1267154120
         NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektd 120
                 e+++wyfF++rd k++ g+r  r++ + yW+++   k+v+s + +++g k+ +vfy g+ p+  +td
  PON33078.1   6 EDEKWYFFTTRDGKHKIGDRVDRIAGNRYWRTSEGGKDVVS-DCSKIGSKDHFVFYIGKPPSDLRTD 71 
                 5789*************************************.8889*************99988886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MYKPYEDEKW YFFTTRDGKH KIGDRVDRIA GNRYWRTSEG GKDVVSDCSK IGSKDHFVFY  60
IGKPPSDLRT DSNIYKHKRA TTKRKKEDGE AIEHNLEDQV HPSEENNNNE PALRQSRAKI  120
RHIAVSGLCN NGNGTTSYSN QPAATDELDI FEDLNSSHDT FTEPIWRYYY TSNQWKQSSI  180
SRTYDRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52890.11e-12NAC family protein