PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON33262.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 207aa MW: 23740.9 Da PI: 9.2218

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON33262.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.7	4.9e-17	18	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT eEd++l+++++ +G+ Wk+ a + g+ R++k+c++rw +yl PON33262.1 18 RGIWTLEEDQKLAQVIEIHGPTKWKSLAVKAGLSRCGKSCRLRWMNYL 65 788*******************************************97 PP
2	Myb_DNA-binding	50.7	4.1e-16	71	116	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l PON33262.1 71 RGNISDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 116 78999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MSMATSSSTQ RAKEEKNRGI WTLEEDQKLA QVIEIHGPTK WKSLAVKAGL SRCGKSCRLR 60 WMNYLRPNIK RGNISDQEED LILRLHKLLG NRWSLIAGRL PGRTDNEIKN YWNSHLSKKI 120 KQMERPNTSA TLTALESHLP EMNTKMKEGD HDHECPKQIT TESTTPKGSH HGKSKSGFLG 180 EEPLNLEWSN FLEVDESWFC FAGSYNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	7e-55	MYB family protein