PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON33318.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

GRAS

Protein Properties

Length: 718aa MW: 77026.3 Da PI: 6.3787

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON33318.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	246.8	8.9e-76	498	712	2	227
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 +lLl+cAeavs++++ +a+++L ++sel++p g++ qR+aayf eA++arl++s+ ++y+a+p+ ++++s++ ++a+++f+ +sP++kfsh+taNq PON33318.1 498 LTLLLQCAEAVSADNFDEANKILLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAAVPAAGVPQSHSQRMASAFQVFNGISPFVKFSHFTANQ 596 579********************************************************************************************** PP GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199 aI ea+e+eervHiiD+di+qGlQWp L++ LasRp+gpp +R+Tg+g s ++le+tg+rL++fA++l++pfef + va+++ +l++e+L+v+++ PON33318.1 597 AIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGT----SMDSLEATGKRLSDFADKLRLPFEFFP-VADKVGNLDPERLNVSKR 690 *********************************************....***********************.7************* PP GRAS 200 EalaVnlvlqlhrlldesvsleserdev 227 Ea+aV++ h+l+d ++s ++ + PON33318.1 691 EAVAVHWLQ--HSLYDVTGSDTN----T 712 *****99..888887877776....4 PP

Sequence ? help Back to Top
Protein Sequence Length: 718 aa Download sequence
MAASALLSSD NAGGDTTSPD VSGNAAATNN NNSDNHTSAT AHVAGAGGSN SSGSSEGLSI 60 TVNRRRFQPQ QQQQQQQRLA VLSVEGGKMV RKRMASEMEV QTATASAAAD YLRLSRRGVP 120 MTIGFSFPAT GDSNSIDSNM INYNVIPAPN PNTSSSAPTL VRPSSVSTTL INPNYSTLLP 180 SSTSLTNMTS GGVSGVLSSS NIATSSQIDP LHYHHPPPHH HNYNNQIRSL PHQTHQQYQS 240 PAVCGFSGLP LFPPETTSRE VNTNTNNNIN INNTSSNTNT NTNNNNNNNN NPSASPPAAG 300 GSGCRVISPT TTSSATTSSM DDNNQNHHNH SASATAWIDG IIKDLIHSST NVSIPQLIHN 360 VREIIYPCNP NLATLLEYRL RTCIASDPPP PPNVAIFSPQ PESSPVAAAA AMNNNNNNSD 420 LYLHWGGAVL PPPPLLPSTT TAAVVDVQSH HAPQQDQHPE SSSPAEEPVQ VPSPAVLLRE 480 KKEELRQQKR DEEGLHLLTL LLQCAEAVSA DNFDEANKIL LEISELSTPF GTSAQRVAAY 540 FSEAMSARLV SSCLGIYAAV PAAGVPQSHS QRMASAFQVF NGISPFVKFS HFTANQAIQE 600 AFEREERVHI IDLDIMQGLQ WPGLFHILAS RPGGPPYVRL TGLGTSMDSL EATGKRLSDF 660 ADKLRLPFEF FPVADKVGNL DPERLNVSKR EAVAVHWLQH SLYDVTGSDT NTLWLLQR

Sequence ? help Back to Top

Protein Sequence Length: 718 aa Download sequence

MAASALLSSD NAGGDTTSPD VSGNAAATNN NNSDNHTSAT AHVAGAGGSN SSGSSEGLSI  60
TVNRRRFQPQ QQQQQQQRLA VLSVEGGKMV RKRMASEMEV QTATASAAAD YLRLSRRGVP  120
MTIGFSFPAT GDSNSIDSNM INYNVIPAPN PNTSSSAPTL VRPSSVSTTL INPNYSTLLP  180
SSTSLTNMTS GGVSGVLSSS NIATSSQIDP LHYHHPPPHH HNYNNQIRSL PHQTHQQYQS  240
PAVCGFSGLP LFPPETTSRE VNTNTNNNIN INNTSSNTNT NTNNNNNNNN NPSASPPAAG  300
GSGCRVISPT TTSSATTSSM DDNNQNHHNH SASATAWIDG IIKDLIHSST NVSIPQLIHN  360
VREIIYPCNP NLATLLEYRL RTCIASDPPP PPNVAIFSPQ PESSPVAAAA AMNNNNNNSD  420
LYLHWGGAVL PPPPLLPSTT TAAVVDVQSH HAPQQDQHPE SSSPAEEPVQ VPSPAVLLRE  480
KKEELRQQKR DEEGLHLLTL LLQCAEAVSA DNFDEANKIL LEISELSTPF GTSAQRVAAY  540
FSEAMSARLV SSCLGIYAAV PAAGVPQSHS QRMASAFQVF NGISPFVKFS HFTANQAIQE  600
AFEREERVHI IDLDIMQGLQ WPGLFHILAS RPGGPPYVRL TGLGTSMDSL EATGKRLSDF  660
ADKLRLPFEF FPVADKVGNL DPERLNVSKR EAVAVHWLQH SLYDVTGSDT NTLWLLQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54220.1	1e-138	GRAS family protein