PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON33352.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HD-ZIP

Protein Properties

Length: 324aa MW: 36786.5 Da PI: 7.0455

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON33352.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.7	9.9e-19	88	141	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe+ +++ e++ +LAk lgL+ rqV +WFqNrRa++k PON33352.1 88 KKRRLNLEQVKTLEKSFEMGNKLEPERKMQLAKALGLQPRQVAIWFQNRRARWK 141 4557899**********************************************9 PP
2	HD-ZIP_I/II	130.1	8.9e-42	87	179	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl+ eqvk+LE+sFe+ +kLeperK++la++Lglqprqva+WFqnrRAR+ktkqlE+dy++Lk++++ lk++n++L++++++L++el++ PON33352.1 87 EKKRRLNLEQVKTLEKSFEMGNKLEPERKMQLAKALGLQPRQVAIWFQNRRARWKTKQLERDYNVLKKQFEVLKADNDSLQDQNKKLHAELSA 179 69**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MAFPPHSFIF QSHQEDHHHH QDHHHHLSPS TSHQHFHGGH HAPFMMKRSL SFSGVDENHH 60 HSMNKCTDQE ILQGEDELSD DGSQLGEKKR RLNLEQVKTL EKSFEMGNKL EPERKMQLAK 120 ALGLQPRQVA IWFQNRRARW KTKQLERDYN VLKKQFEVLK ADNDSLQDQN KKLHAELSAL 180 KGRDNTSNES GRDQNLKKEA DQGSWSNGSD QNSSDVNLDI SRTPLVINTT TTISSASSQL 240 VHGKNLFPSN LRPSTITQLL QGSSSSSRSD FQCLKVDPHQ MVQSEESFCN MFVNGGGGGG 300 TTGGVEDQQP SFWPWAPEQH NYFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	144	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15150.1	3e-77	HD-ZIP family protein