PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON33556.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GeBP
Protein Properties Length: 230aa    MW: 26219.5 Da    PI: 4.944
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON33556.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57373.24.7e-2340134297
      DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWg 97 
                  +qrl  eeDei++LqGl +f +k+g +  + i++f++ + +s+  +vs++ql   +  +K+Kf++k+ k  +++++p+f++ hdqk++elsk+iWg
  PON33556.1  40 SSQRLLGEEDEILVLQGLTEFYEKNGNN--STISEFCNVMASSLGENVSQKQLNHIVCCMKRKFEDKEMKiCDDDESPAFASLHDQKVYELSKMIWG 134
                 589***********************66..679********************************999886889999*******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MEDPYNSIVP DSVDEYEPNP KKSKFSADEK MKRVADASSS SQRLLGEEDE ILVLQGLTEF  60
YEKNGNNSTI SEFCNVMASS LGENVSQKQL NHIVCCMKRK FEDKEMKICD DDESPAFASL  120
HDQKVYELSK MIWGNRITTT TTTTTTTDVA AAAADSDANN EDRLGMLFYD YYSRHGLNLD  180
LFEESKGIYL AKRWVKFKVS ECKYLIQRSK FEAKMQNVKL QAYKKESVGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.14e-13GeBP family protein