PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON33757.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family NAC
Protein Properties Length: 206aa    MW: 24117.1 Da    PI: 4.7554
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON33757.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM93.34.1e-2991301128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                 lppGf+F+Ptdeelv ++L +k+ + +++  ++i+++d+ ++ +Pw+++ ++ ++ k +yfF k        +r+ ra+++gyWk+   ++++++ +g+
  PON33757.1   9 LPPGFQFRPTDEELVLHFLYPKAFRLPCNHPNIIPDLDLDHLhHPWEFDGTALSSGKMYYFFNK--------TREDRAISNGYWKELDINEPIFV-SGN 98 
                 79*************************999999*****977549****9555555566666654........47789******************.999 PP

         NAM  99 lvglkktLvfy..kgrapkgektdWvmheyrl 128
                 +v +kk Lvfy   ++ +++++t+Wvm+ey+l
  PON33757.1  99 KVAVKKYLVFYifGQSPSSPSETNWVMEEYSL 130
                 9**********8545777789*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MGDNQSVKLP PGFQFRPTDE ELVLHFLYPK AFRLPCNHPN IIPDLDLDHL HHPWEFDGTA  60
LSSGKMYYFF NKTREDRAIS NGYWKELDIN EPIFVSGNKV AVKKYLVFYI FGQSPSSPSE  120
TNWVMEEYSL CNNVGLNITT SPAYKRRKQK IDLKWVLCRV HERKDDTITR QSIRYEDDDD  180
GTELSCLDEM FLSSLDDDLE EISMQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.12e-54NAC family protein