PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON33930.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 662aa MW: 71383.1 Da PI: 4.344

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON33930.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.1	1.5e-11	20	61	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 g+WT +E +ll++a +++ + W+ Ia+++ ++t qc++++ PON33930.1 20 GKWTDQETLLLLEALELYKEN-WNEIAEHVA-TKTKAQCILHFV 61 89***************88.*****.********95 PP

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence
MSSSDFILME PGEVPGLSGG KWTDQETLLL LEALELYKEN WNEIAEHVAT KTKAQCILHF 60 VQMPIEDTFL DLDDDIDSSS KEAADPASSD KGSLAAKDAA ETTEAEPAAN ENQSTTTPME 120 TSKEETTEVK ASQDTSKAED KDKVMVDQET SKLVDSSESN GGQDTGENCA MKALKEAFEA 180 VGYPLTPEGP HSFAEVGNPV MALAAFLGHL VGPDVATASA HNSLKSISGS SPGIELAARH 240 CFLLEDPPND EKEPAGLSSI VAETTIGETQ KEETLEDKSQ KEDLSNDHSG EKNEDSVLEE 300 KRTVDASNIE RETPEKSDDA KEQDIVIACE ESDGTLNTSN KSSTSEIRKD QPPSTLTGLV 360 DLKSGVELLP SSVKESEVKS GEPAEPTKTS KDVEMAEPVP SEKNELQQTV SSNVKELTDS 420 ADALDQVGVL ADSLPLKKNG HQQPEISSSV GKPPSDVPID IDMVAHSEHS EKNEPSQPSE 480 PNATVEKRAT DDHTKDGNIK NHAEIKEDDK IDKIKRAAVS AISAAAVKAK LLANQEEDQI 540 RQLSTLLIEK QMQKLETKLG FFNEMENVLM RVREQLDRSR QRLYHERAQI IAARLGLPAS 600 SSRVPPSSVP TNRIGMNVAS SVPRPPLGMV PQRPPMSRPM GTVAPTPSIP LSTTTTGSQM 660 QG

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence

MSSSDFILME PGEVPGLSGG KWTDQETLLL LEALELYKEN WNEIAEHVAT KTKAQCILHF  60
VQMPIEDTFL DLDDDIDSSS KEAADPASSD KGSLAAKDAA ETTEAEPAAN ENQSTTTPME  120
TSKEETTEVK ASQDTSKAED KDKVMVDQET SKLVDSSESN GGQDTGENCA MKALKEAFEA  180
VGYPLTPEGP HSFAEVGNPV MALAAFLGHL VGPDVATASA HNSLKSISGS SPGIELAARH  240
CFLLEDPPND EKEPAGLSSI VAETTIGETQ KEETLEDKSQ KEDLSNDHSG EKNEDSVLEE  300
KRTVDASNIE RETPEKSDDA KEQDIVIACE ESDGTLNTSN KSSTSEIRKD QPPSTLTGLV  360
DLKSGVELLP SSVKESEVKS GEPAEPTKTS KDVEMAEPVP SEKNELQQTV SSNVKELTDS  420
ADALDQVGVL ADSLPLKKNG HQQPEISSSV GKPPSDVPID IDMVAHSEHS EKNEPSQPSE  480
PNATVEKRAT DDHTKDGNIK NHAEIKEDDK IDKIKRAAVS AISAAAVKAK LLANQEEDQI  540
RQLSTLLIEK QMQKLETKLG FFNEMENVLM RVREQLDRSR QRLYHERAQI IAARLGLPAS  600
SSRVPPSSVP TNRIGMNVAS SVPRPPLGMV PQRPPMSRPM GTVAPTPSIP LSTTTTGSQM  660
QG