PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON34109.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

ARR-B

Protein Properties

Length: 567aa MW: 62749.9 Da PI: 6.4467

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON34109.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.2	3.7e-28	316	370	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH++Fv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYR++ PON34109.1 316 KMKVDWTPELHKKFVHAVEQL-GVDQAIPSRILELMKVEGLTRHNVASHLQKYRMH 370 5689***************.******************************96 PP
2	Myb_DNA-binding	43.8	6e-14	319	368	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av+qlG + +++I + m +g+t+ ++ s++qky+ PON34109.1 319 VDWTPELHKKFVHAVEQLGVDqaIPSRILELMKvEGLTRHNVASHLQKYR 368 57***********************************************7 PP
3	Response_reg	32.7	3.7e-12	20	126	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 +l+ d++ + + +r+ le +y +v ++ + +eal+ + ++ ++l ++ ++ +G ++k +++ + lpii+ + +++ +++ +Ga PON34109.1 20 ILVLDEDTTSAAEIRSKLEAMDY-VVSTFCNETEALTAFSNEPesFHLAIVEVNSN--NGCGTFKFLETTK-GLPIIMTSNIHCLSTMMKCIALGAV 112 7899*****************.***********88887799999998766..6777888887766.89999999********* PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 +fl Kp ++++l++ PON34109.1 113 EFLPKPLSEDKLRN 126 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence
MVCTANDLQE WKDFPKGLRI LVLDEDTTSA AEIRSKLEAM DYVVSTFCNE TEALTAFSNE 60 PESFHLAIVE VNSNNGCGTF KFLETTKGLP IIMTSNIHCL STMMKCIALG AVEFLPKPLS 120 EDKLRNIWQH VVHKAFNAGG GLLPLPLKPV KESIASLLHL KHENVEQDSK ISVEIENLSE 180 TKENDQEQSA GSDKYPAPST PQLKQGARLL DDGDCPDQTN CSAGKENGEQ DGDCKSVETT 240 YGDSAAEDTI LIGETETPVK TMIKKEDSID GSKSKSHMSS HLHNGNSLIN VIGGADHPGK 300 ASCLTNTSLF KSNRKKMKVD WTPELHKKFV HAVEQLGVDQ AIPSRILELM KVEGLTRHNV 360 ASHLQKYRMH KRHILPKEED RRWPRPRDPV QKNYYPQHPI MAFPTYHSNH ALPVAPVYSM 420 WGQPGGHPAS VQMWGPPAYP PWQATESWQW KPYSGMHADA WGCPVMPPPH GPYASYPQNV 480 SGFHNVGVVD NVCSMPQNSF DFHPAEEVID KVVKEAINKP WLPLPLGLKP PSTDSVLSEL 540 SRQGISSIPP HINGSDSFCH GTGSHHD

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence

MVCTANDLQE WKDFPKGLRI LVLDEDTTSA AEIRSKLEAM DYVVSTFCNE TEALTAFSNE  60
PESFHLAIVE VNSNNGCGTF KFLETTKGLP IIMTSNIHCL STMMKCIALG AVEFLPKPLS  120
EDKLRNIWQH VVHKAFNAGG GLLPLPLKPV KESIASLLHL KHENVEQDSK ISVEIENLSE  180
TKENDQEQSA GSDKYPAPST PQLKQGARLL DDGDCPDQTN CSAGKENGEQ DGDCKSVETT  240
YGDSAAEDTI LIGETETPVK TMIKKEDSID GSKSKSHMSS HLHNGNSLIN VIGGADHPGK  300
ASCLTNTSLF KSNRKKMKVD WTPELHKKFV HAVEQLGVDQ AIPSRILELM KVEGLTRHNV  360
ASHLQKYRMH KRHILPKEED RRWPRPRDPV QKNYYPQHPI MAFPTYHSNH ALPVAPVYSM  420
WGQPGGHPAS VQMWGPPAYP PWQATESWQW KPYSGMHADA WGCPVMPPPH GPYASYPQNV  480
SGFHNVGVVD NVCSMPQNSF DFHPAEEVID KVVKEAINKP WLPLPLGLKP PSTDSVLSEL  540
SRQGISSIPP HINGSDSFCH GTGSHHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-130	ARR-B family protein