PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON34294.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WOX

Protein Properties

Length: 228aa MW: 25520.8 Da PI: 5.6313

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON34294.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.8	6.1e-21	87	147	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+++t+ ql++Le+ Fe+ n +ps+++++ ++++l +++e++V++WFqNrRa+ k+ PON34294.1 87 RHRWSPTPLQLQILERIFEEgNGTPSKQKIKGITSELsqhgQISETNVYNWFQNRRARSKR 147 89***************99************************************97 PP
2	Wus_type_Homeobox	99.2	3.1e-32	86	149	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RW+Ptp Q++iLe+++++G tP+k++i+ it+eL+++G+i+++NV++WFQNr+aR+++kq PON34294.1 86 ARHRWSPTPLQLQILERIFEEGNGTPSKQKIKGITSELSQHGQISETNVYNWFQNRRARSKRKQ 149 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MEKENPKKKG VVGAGAAVAA AGLYVKVMTD EQMELLRRQI SVYTTICEKL AEMHKAISAQ 60 HDLSGMKLGA LHCDPLMAYA GHKITARHRW SPTPLQLQIL ERIFEEGNGT PSKQKIKGIT 120 SELSQHGQIS ETNVYNWFQN RRARSKRKQS VPAPNNMEPE VEAETEFLKD STKPEDTDFY 180 DNSAPRDHDV YFLSPEVDTE ELISWSANGS VMELQSVPSW GGFDVGEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	141	149	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	2e-70	WOX family protein