PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON34325.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

FAR1

Protein Properties

Length: 453aa MW: 50365.2 Da PI: 5.414

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON34325.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	42.4	2.3e-13	140	216	2	77
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwe 77 fY Y++ vGF+v+k+ k+ + g i r++vCs+eg r++++ + +++r+++a tr+gC a ++v+ ++ +g+w PON34325.1 140 FYYMYSSVVGFNVQKDDVKHD-KRGLIFLRRWVCSMEGLRRKKHLErIDRKRKPKALTRVGCCAAFRVNYNRkKGNWI 216 9**************9998.5566999******99998775789999**************999889996 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MSGCNGAMNC LREDGSARDK VEDGGNGNTS SVQQISSLRE EVGSNKGSHL NYDCREVENF 60 TSNRELSMPR CHGAFSVENV GSNRDLSMQD FGLSTPVGSS SIERCEHSNF CMGIGKCVDD 120 LATENVVGLE FETLEKAEAF YYMYSSVVGF NVQKDDVKHD KRGLIFLRRW VCSMEGLRRK 180 KHLERIDRKR KPKALTRVGC CAAFRVNYNR KKGNWIDKEF DNIVDGREGS ISGVQPRTCD 240 VVNGIALPRW TLMDEDDVAD GREASTSGFQ PRTCDVVHGI TLPPWTLTDE DNVANGREGS 300 TSGVQPITCD VHLGVYFTEV NAETVTMLLQ MVGGLHEVVM ETILQARDKL KVASEKVQQK 360 DREIVNEGKY CEESNDDPTD ERIFGVMNLN EVVGNEGVTD KGGEVGRQNE SFHRSVNVSD 420 GSGSYFKENN SKKHNLKDVE TSNRLPKKAK TNL

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MSGCNGAMNC LREDGSARDK VEDGGNGNTS SVQQISSLRE EVGSNKGSHL NYDCREVENF  60
TSNRELSMPR CHGAFSVENV GSNRDLSMQD FGLSTPVGSS SIERCEHSNF CMGIGKCVDD  120
LATENVVGLE FETLEKAEAF YYMYSSVVGF NVQKDDVKHD KRGLIFLRRW VCSMEGLRRK  180
KHLERIDRKR KPKALTRVGC CAAFRVNYNR KKGNWIDKEF DNIVDGREGS ISGVQPRTCD  240
VVNGIALPRW TLMDEDDVAD GREASTSGFQ PRTCDVVHGI TLPPWTLTDE DNVANGREGS  300
TSGVQPITCD VHLGVYFTEV NAETVTMLLQ MVGGLHEVVM ETILQARDKL KVASEKVQQK  360
DREIVNEGKY CEESNDDPTD ERIFGVMNLN EVVGNEGVTD KGGEVGRQNE SFHRSVNVSD  420
GSGSYFKENN SKKHNLKDVE TSNRLPKKAK TNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	4e-11	FAR1 family protein