PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON34376.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

GeBP

Protein Properties

Length: 248aa MW: 29460.5 Da PI: 9.2382

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON34376.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	66.9	4.4e-21	78	173	2	98
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksi.sfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 f+r ws++ e+v+L+ l+ f++k++ +ps +++fy ++kk i ++++ k ql +K+r++K Kf++k++k + + + + dq if+lsk iWgs PON34376.1 78 PFKRFWSQKHELVILKHLLRFAEKKKCKPSGvKMSKFYVYLKKIItDLDFDKIQLGDKVRKMKIKFENKMRK---KPDSVYPDKRDQRIFQLSKEIWGS 173 599**********************99988*******99459*******************9...888999**************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MEDDLHPHLQ NEENLHDDHQ LGLNGNQNNH HHDVESASGV ERAAWKRRRV GNDDADQAMA 60 QDWDAAFDEV NDNYKLQPFK RFWSQKHELV ILKHLLRFAE KKKCKPSGVK MSKFYVYLKK 120 IITDLDFDKI QLGDKVRKMK IKFENKMRKK PDSVYPDKRD QRIFQLSKEI WGSEMRAATK 180 NVTSRPEESI QKEFAELVNQ MSFNKNSLLD GLAMMIETPM KAELVRNWQI LHAEYFRNRW 240 NIEEKVFS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	46	50	KRRRV
2	135	150	KVRKMKIKFENKMRKK
3	137	151	RKMKIKFENKMRKKP
4	138	150	KMKIKFENKMRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G11510.1	3e-10	GeBP family protein