PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON34837.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

SBP

Protein Properties

Length: 176aa MW: 19796.3 Da PI: 9.9029

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON34837.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.7	2.5e-41	60	137	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+e+C++dls+ak+yhrrhkvCe h+ka+vvlvsg++qrfCqqCsrfhelsefD+++rsCrrrLa+hnerrrk+++ PON34837.1 60 CCQAEKCRVDLSDAKQYHRRHKVCELHAKAQVVLVSGIRQRFCQQCSRFHELSEFDDTRRSCRRRLAGHNERRRKSST 137 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence
MDLGKTERNK RMVSGKEKMV LKEEEEEEGS EQEDKRKKGV LGSGKKGSGG GGGLSGGMRC 60 CQAEKCRVDL SDAKQYHRRH KVCELHAKAQ VVLVSGIRQR FCQQCSRFHE LSEFDDTRRS 120 CRRRLAGHNE RRRKSSTESP PEGSSRKGTV TQLKDMVCGQ VDDRGRIQIT VQENAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53160.1	4e-43	SBP family protein