PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON35060.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 344aa MW: 38458.1 Da PI: 7.3629

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON35060.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.1	4.2e-33	10	64	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLH+rFveav+qLGG++kAtPk+++++m+++gLtl+h+kSHLQkYRl PON35060.1 10 KPRLKWTPELHQRFVEAVNQLGGADKATPKSLMRVMGIPGLTLYHLKSHLQKYRL 64 79****************************************************8 PP
2	Myb_DNA-binding	63.5	4.2e-20	12	63	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e+++++v+av+qlGg t+k+ +r mg g+tl+++ks++qky+ PON35060.1 12 RLKWTPELHQRFVEAVNQLGGAdkaTPKSLMRVMGiPGLTLYHLKSHLQKYR 63 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MNLVLSTDAK PRLKWTPELH QRFVEAVNQL GGADKATPKS LMRVMGIPGL TLYHLKSHLQ 60 KYRLGKSQQS ETFSDDKQEV SFNASDYKEI QGSDGHFSRE IDDETQNQMN EGLHIAQALQ 120 LQMEVQRKLH EQIEVQRHLQ LRIEAQGKYL QSVLKKAQET LAGYSSSSVG VELTKAELSR 180 LLSMVNNGCP TSSFSELTET RDLSLEEGIE RKQMRGTICS MESSLTSSES SGRKEEKKPM 240 DNNGDPQKSN TNSVELQLME VHPEHKPWNN ATSNQVGGRK RNGSTLTDGI CVEQPISKRS 300 PSHVDKNSNH LRKSGLLGTL DLNSKYQNDI DSGPKVIDLN CKGI

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MNLVLSTDAK PRLKWTPELH QRFVEAVNQL GGADKATPKS LMRVMGIPGL TLYHLKSHLQ  60
KYRLGKSQQS ETFSDDKQEV SFNASDYKEI QGSDGHFSRE IDDETQNQMN EGLHIAQALQ  120
LQMEVQRKLH EQIEVQRHLQ LRIEAQGKYL QSVLKKAQET LAGYSSSSVG VELTKAELSR  180
LLSMVNNGCP TSSFSELTET RDLSLEEGIE RKQMRGTICS MESSLTSSES SGRKEEKKPM  240
DNNGDPQKSN TNSVELQLME VHPEHKPWNN ATSNQVGGRK RNGSTLTDGI CVEQPISKRS  300
PSHVDKNSNH LRKSGLLGTL DLNSKYQNDI DSGPKVIDLN CKGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69580.1	4e-93	G2-like family protein