PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON35116.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 661aa MW: 71378 Da PI: 6.7211

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON35116.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.5	1.8e-30	387	445	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ PON35116.1 387 ADGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILVTTYEGNHNHP 445 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 661 aa Download sequence
MAKGSGLSID SDPIGFFIHK PTVLNSFQQD YNNNNNNHYK KINYKHLLPS SSMDTTTIHE 60 RSSPPPPHPT LQIPVNLNCA HQVDSPAQSD ENRTVIDEMD FFADNRNRDT KASPSSHDHD 120 IGDHHKSLND HQIDIEMNVN TGLNLLTTNT SSDQSMVDDG ISNDVAADNK KAKTHELAVL 180 HAEFEQMKAE NQRLKNMLNQ VTNNYNALQM HLFALTQNQN RKPENSSDGH GLVVGKVELD 240 DDHDHDHRQK KIIKLGGNND PGGGAPPVVP RRFMDLGLAA AASGGEADET SPSLSEERRS 300 ESVKEGHGGG DELEKNKEVN RALMVIRERE ESPDQPSQGN WGQNNNSNKV PRTTSSGSVK 360 DAPDQTEATM RKARVSVRAR SDAPMIADGC QWRKYGQKMA KGNPCPRAYY RCTMAAGCPV 420 RKQVQRCAED RTILVTTYEG NHNHPLPPPA MAMASTTSSA ARMLLSGSMS SSDGIMNSNF 480 LARTMLPCSS SMATISASAP FPTVTLDLTQ SPNPLHLQKP PQQPQFPLAL PPSPSLANIG 540 PTAAATAAAF LPQIFGQAIY NQSKFSGLQF SSIGQENSMV PPEARLGHQL PPQPNQLGQR 600 QNSLSDSVTA ATAAIAADPN FTAALAAAIT SIISGAHPNN VSNNNNNANN GNGNATTSNS 660 N

Sequence ? help Back to Top

Protein Sequence Length: 661 aa Download sequence

MAKGSGLSID SDPIGFFIHK PTVLNSFQQD YNNNNNNHYK KINYKHLLPS SSMDTTTIHE  60
RSSPPPPHPT LQIPVNLNCA HQVDSPAQSD ENRTVIDEMD FFADNRNRDT KASPSSHDHD  120
IGDHHKSLND HQIDIEMNVN TGLNLLTTNT SSDQSMVDDG ISNDVAADNK KAKTHELAVL  180
HAEFEQMKAE NQRLKNMLNQ VTNNYNALQM HLFALTQNQN RKPENSSDGH GLVVGKVELD  240
DDHDHDHRQK KIIKLGGNND PGGGAPPVVP RRFMDLGLAA AASGGEADET SPSLSEERRS  300
ESVKEGHGGG DELEKNKEVN RALMVIRERE ESPDQPSQGN WGQNNNSNKV PRTTSSGSVK  360
DAPDQTEATM RKARVSVRAR SDAPMIADGC QWRKYGQKMA KGNPCPRAYY RCTMAAGCPV  420
RKQVQRCAED RTILVTTYEG NHNHPLPPPA MAMASTTSSA ARMLLSGSMS SSDGIMNSNF  480
LARTMLPCSS SMATISASAP FPTVTLDLTQ SPNPLHLQKP PQQPQFPLAL PPSPSLANIG  540
PTAAATAAAF LPQIFGQAIY NQSKFSGLQF SSIGQENSMV PPEARLGHQL PPQPNQLGQR  600
QNSLSDSVTA ATAAIAADPN FTAALAAAIT SIISGAHPNN VSNNNNNANN GNGNATTSNS  660
N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	4e-74	WRKY family protein