PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON35187.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 373aa    MW: 42407 Da    PI: 4.7422
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON35187.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.65.9e-18158200145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      ++ W++eEd+ l++a+++ G++ W+ Ia++++ gRt++++k++w+
       PON35187.1 158 KDTWSEEEDKVLIQAHAEIGNK-WAEIAKRLP-GRTENSIKNHWN 200
                      679*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    
MKPCSKDDHA SQLPINMASS PQGNPYIQDF LYDILDHDHH FPANGPSSNP IFGSKTPCFD  60
PNLEAYTYRG FENNMGLFYD QYYNRSFAEN NNFQRGEYLD ILPCTNLIDM IGSNWSCCNP  120
NSQEDMKPLS LVVPDHHDVS CITAENGYYK KVAMNKNKDT WSEEEDKVLI QAHAEIGNKW  180
AEIAKRLPGR TENSIKNHWN ATKRRQHSKR KCRSKYPRGS TLLQDYIKSL NLGTSSTTRQ  240
NQRQTTATKN TINITNDTII TDESVPFTQP PKTTLEFCFT TNDYDGDFDE DPADFCFDKN  300
NFQDGTYSTI EYFLDETLPF VAGYSKLEPG SDHMELPGED NNNFAAVLKS DGLVKDVDLV  360
EMIAKVNEVI ANV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.19e-39MYB family protein