PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON35251.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 601aa MW: 65280 Da PI: 7.086

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON35251.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.6	2.7e-33	247	304	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k PON35251.1 247 DDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGQITEIVYKGSHNHPK 304 8**************************************.*************85 PP
2	WRKY	105.4	2.9e-33	421	479	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++d ++v++tYeg+Hnh+ PON35251.1 421 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHNHD 479 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MASSSGSLDT SANSFPNFTF SAHPFMTTSF SDLLASGTDD DPTACAGDNG RRGGLSDRIA 60 ERTGWGVPKF KSLPPPSLPI SPPSVSPSSY FAIPAGLSPA ELLDSPVLLS SSNILPSPTT 120 GTFAAAASNW KNNSGNNQQS VKQEEKNYVS DFSFQTQTRP PTTSSSSMFQ SSNTATQAQQ 180 AWTNSFQEPS KQQDDFSSGK SMAKPEFASA QSYSSEVKNN VQTNGGFQSD YSNNYPQQTQ 240 ALSRRSDDGY NWRKYGQKQV KGSENPRSYY KCTYPNCPTK KKVERSLDGQ ITEIVYKGSH 300 NHPKPQATRR SSSSSSAASS HAIQPSNLSN SEIPDQSYVS QGNGQMDLVT TPENSSISIG 360 DDDLDQSSQK TKSGGDDFDD DEPDAKRWKR EGENECISAP GSRTVREPRV VVQTTSDIDI 420 LDDGYRWRKY GQKVVKGNPN PRSYYKCTNP GCPVRKHVER ASHDLRAVIT TYEGKHNHDV 480 PAARGSGGHS VNRALPNNIN NSNNNNAVAA IRPSAMAAHN MTNHSANNNP LQNPRLPTSS 540 EGQVPFTLEM LQNPGSFGFA GFGNSGASSY MTQSQLTDNA MYSKTKEEPR DDNTFLESLL 600 C

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MASSSGSLDT SANSFPNFTF SAHPFMTTSF SDLLASGTDD DPTACAGDNG RRGGLSDRIA  60
ERTGWGVPKF KSLPPPSLPI SPPSVSPSSY FAIPAGLSPA ELLDSPVLLS SSNILPSPTT  120
GTFAAAASNW KNNSGNNQQS VKQEEKNYVS DFSFQTQTRP PTTSSSSMFQ SSNTATQAQQ  180
AWTNSFQEPS KQQDDFSSGK SMAKPEFASA QSYSSEVKNN VQTNGGFQSD YSNNYPQQTQ  240
ALSRRSDDGY NWRKYGQKQV KGSENPRSYY KCTYPNCPTK KKVERSLDGQ ITEIVYKGSH  300
NHPKPQATRR SSSSSSAASS HAIQPSNLSN SEIPDQSYVS QGNGQMDLVT TPENSSISIG  360
DDDLDQSSQK TKSGGDDFDD DEPDAKRWKR EGENECISAP GSRTVREPRV VVQTTSDIDI  420
LDDGYRWRKY GQKVVKGNPN PRSYYKCTNP GCPVRKHVER ASHDLRAVIT TYEGKHNHDV  480
PAARGSGGHS VNRALPNNIN NSNNNNAVAA IRPSAMAAHN MTNHSANNNP LQNPRLPTSS  540
EGQVPFTLEM LQNPGSFGFA GFGNSGASSY MTQSQLTDNA MYSKTKEEPR DDNTFLESLL  600
C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-106	WRKY family protein