PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON35304.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family S1Fa-like
Protein Properties Length: 257aa    MW: 29083.9 Da    PI: 7.828
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON35304.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA98.64.3e-31142207570
        S1FA   5 kveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70 
                 ++ a Gln   ivll+v glll+flv+ny+ly+yaq nlPPrkkkP s+kklkr+++kqG+++PGe
  PON35304.1 142 NAKAEGLNARSIVLLIVIGLLLIFLVSNYALYMYAQTNLPPRKKKPPSQKKLKRDRFKQGLSAPGE 207
                 56789************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MWITLDYVVV LDKIVDDYDL CSNFQFRIPG ASLRPYLFPS RCNLYDVPAG LYAGHGSLSP  60
ESEFLSQVVE QDVLEDVRAM MELASVPQQA DPEQDLPMQQ QCFGIDYPFD EAWSSFLFIL  120
VALKLVQRRS YFIQREGTLI KNAKAEGLNA RSIVLLIVIG LLLIFLVSNY ALYMYAQTNL  180
PPRKKKPPSQ KKLKRDRFKQ GLSAPGEGRI MLLGIREREN QTVVACLTSV SKWASGVYHA  240
LNNFFGVSLP FFLACLV