PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON35355.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 251aa MW: 28306.3 Da PI: 8.6043

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON35355.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.8	5.1e-15	70	116	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+E+rRR+riN+ fe+Lr+l+P a kK++Ka+ L +++ ++k+L PON35355.1 70 KNHSEAEKRRRARINTHFETLRSLVPGA-----KKMDKASLLAEVISHLKDL 116 58***********************9.....9**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MEPFSWSSSG VFSSWFERRN DGFLANSSLR CGSASSSSLV LDSVRGELVE APVKLERKGM 60 SAERSMEALK NHSEAEKRRR ARINTHFETL RSLVPGAKKM DKASLLAEVI SHLKDLKRKA 120 REAGEDCVLP KDSDEVKVES EDELEGRPYS IRVSLSCDYK PGLLSDLRHA LDALHMIIVR 180 AEIVTLGCRM KNVFVITTCD EDKVEDNEIR RFRAKSICQA LRSVINKFSA SDELLDTTLS 240 NKRRRVSIFN P

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	77	102	KRRRARINTHFETLRSLVPGAKKMDK
2	242	246	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G25710.1	2e-24	bHLH family protein