PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON35415.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 552aa MW: 60210.9 Da PI: 7.0895

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON35415.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.3	2.1e-30	229	288	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+ PON35415.1 229 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAaSCPVRKQVQRCAEDMSILITTYEGTHNHP 288 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MPNSYGSGIE EKRVDCKIGH LDQDHQTNNL VLKKANELET AKAEMGEVRE ENKRLKMVLH 60 HIKKDYESLQ LRFFDIVKDD QDLKKPTDHN NNSAHGVDHV HHHRETDEAE LVSLSLGRSP 120 KEPKSSINIV EDTRTNLSKI RDQDHDHHEY DDQDLIKANL TLGLGSEMQL TSELVTDPSP 180 ENSSELEVKE LAGAKTPKRN NNNGDDEVSQ AHAKRARVSV RARCDTPTMN DGCQWRKYGQ 240 KIAKGNPCPR AYYRCTVAAS CPVRKQVQRC AEDMSILITT YEGTHNHPLP VTATAMASTT 300 SAAASMLLSG PSASHDPIST VGFTPSKNSS SALNINGPHN NFNLFDTLRT KQFYSPINPA 360 SPLFPTITLD LTAPQVSSTS AHFNRSSSFA PTSRSGLSFG PTQPNVLQPV SGNGYLSYGP 420 MSYEKAQSPM NGSLNLGKQA QEYIYQRCAE KMVNNNSQSS SSVQESLTET LTKAITSDPS 480 TFKSVIAAAI SSMVGGGEAH LGSKQDGVEK LGQRLTLGEA ATTAGVSHNP LTQNGQLGLA 540 SSYFNRLSSS NF

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MPNSYGSGIE EKRVDCKIGH LDQDHQTNNL VLKKANELET AKAEMGEVRE ENKRLKMVLH  60
HIKKDYESLQ LRFFDIVKDD QDLKKPTDHN NNSAHGVDHV HHHRETDEAE LVSLSLGRSP  120
KEPKSSINIV EDTRTNLSKI RDQDHDHHEY DDQDLIKANL TLGLGSEMQL TSELVTDPSP  180
ENSSELEVKE LAGAKTPKRN NNNGDDEVSQ AHAKRARVSV RARCDTPTMN DGCQWRKYGQ  240
KIAKGNPCPR AYYRCTVAAS CPVRKQVQRC AEDMSILITT YEGTHNHPLP VTATAMASTT  300
SAAASMLLSG PSASHDPIST VGFTPSKNSS SALNINGPHN NFNLFDTLRT KQFYSPINPA  360
SPLFPTITLD LTAPQVSSTS AHFNRSSSFA PTSRSGLSFG PTQPNVLQPV SGNGYLSYGP  420
MSYEKAQSPM NGSLNLGKQA QEYIYQRCAE KMVNNNSQSS SSVQESLTET LTKAITSDPS  480
TFKSVIAAAI SSMVGGGEAH LGSKQDGVEK LGQRLTLGEA ATTAGVSHNP LTQNGQLGLA  540
SSYFNRLSSS NF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	4e-83	WRKY family protein