PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON35681.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 555aa    MW: 61526.6 Da    PI: 6.2614
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON35681.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS257.74.2e-791685472374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++lL  cA a+++g+ +++q+lL  l+elas +gd+++Rla++ ++AL +++++s+s  ++ + + + s+ +     ++l  f+evsP++ f + +aN+
  PON35681.1 168 EQLLNPCAAAITEGNCTRVQHLLYVLHELASLTGDANHRLAFHGLRALTHHISSSGSAYSAPVGTVTFSSAEPRFFQKSLIKFYEVSPWFAFPNNIANS 266
                 689***************************************************9999999999999997777777777777***************** PP

        GRAS 101 aIleavege....ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg.........skeeleetgerLakfAeelgvpfefnvlvakr 185
                  Il+ + +e      +Hi+D+++s+G+QWp Ll+aL+ R+ ++pp +RiT ++  +++         +     +  +rL  fA+++++++++n l  + 
  PON35681.1 267 SILQLLGEEndrtCNLHILDIGVSHGVQWPILLEALTRRSgGPPPLVRITIIAGTAETdqntaapfsKGPPGDNFSSRLLCFAKSMNINLQINRLDNQP 365
                 ******9987544456************************55666*****99886666678899998888999*********************9999* PP

        GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh...nsesFlerflealeyysalfdsleaklpresee 281
                 l++l+++ ++ +++E+l+V+ +++lh+l +++    +er+e+L+ +++++Pk v+++e+++++   + ++F+++f++ +ey + ++ds+++ +    + 
  PON35681.1 366 LQNLNPQIIDSSQDETLIVCAQFRLHHLNHNT---LDERTEFLSSLRRMEPKGVILSENNIECscsSCGNFAAGFSRRVEYLWRFLDSTSSAF----KG 457
                 ****************************8444...44477*******************96663244569*******************8886....88 PP

        GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 r + Er+l++ e+ ++++++g++    +e +ekW er++ aGF   +l+e+a +  ++llrk++ ++++rvee++g + l Wk++p+ ++S W+
  PON35681.1 458 RESSERQLMEGEAAKALTNRGEM----NEGKEKWCERMRGAGFVGEALGEDAIDGGRALLRKYDsNWEMRVEEKDGFAGLWWKGQPVSFCSLWK 547
                 999999999999*******9999....9************************************9999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 555 aa     Download sequence    
MTSEDPEPNP TSDHIMDWLE DSVSFLPSFL DDPYHSGEIN GYQWWDENQD LGHDLIHTLD  60
TSLNSPSADA AATTVTANPA NPTLSNHLPL PNLAKKRKSA DDPIPKTSQN HHNHRRNHGR  120
RINQAEDGNA AVEEVVAIRK SVGNKKSSAK ATGNNCNNGN NKDGRWAEQL LNPCAAAITE  180
GNCTRVQHLL YVLHELASLT GDANHRLAFH GLRALTHHIS SSGSAYSAPV GTVTFSSAEP  240
RFFQKSLIKF YEVSPWFAFP NNIANSSILQ LLGEENDRTC NLHILDIGVS HGVQWPILLE  300
ALTRRSGGPP PLVRITIIAG TAETDQNTAA PFSKGPPGDN FSSRLLCFAK SMNINLQINR  360
LDNQPLQNLN PQIIDSSQDE TLIVCAQFRL HHLNHNTLDE RTEFLSSLRR MEPKGVILSE  420
NNIECSCSSC GNFAAGFSRR VEYLWRFLDS TSSAFKGRES SERQLMEGEA AKALTNRGEM  480
NEGKEKWCER MRGAGFVGEA LGEDAIDGGR ALLRKYDSNW EMRVEEKDGF AGLWWKGQPV  540
SFCSLWKLDM KVSDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.11e-172GRAS family protein