PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON35684.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 143aa    MW: 16327.6 Da    PI: 10.4446
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON35684.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.83.3e-155295146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     rg++ +eE++ + +++k+lG++ W+ Ia +++ gRt++++k++w++
       PON35684.1 52 RGNFGPEEEDVISKLHKLLGNR-WAFIAGYLP-GRTDNEIKNYWHT 95
                     89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MAKDNGDTFL KEQRKKELSI LSSIISYVQG SRDVLKSCRL RWLNYRRPGI KRGNFGPEEE  60
DVISKLHKLL GNRWAFIAGY LPGRTDNEIK NYWHTKLSKL KPKPSSSAPA ESNNAPKPSP  120
TNESSEEPNL TKKQHQICKP QTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06180.12e-29MYB family protein