PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON35830.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 536aa MW: 58025.1 Da PI: 6.0508

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON35830.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.5	1.5e-05	419	456	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L PON35830.1 419 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 456 677888999*****998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MAEEFQIQGG ICGGNWWGSS RSMFTAAASP CSFGSFGWPS HDMLDAKAAG AARSSSSSGE 60 ETDHNVFQEV VHDQDDDNHD HHNNIDQKPH LQITADNSPV TGSANILIDS TLQMMGFGLL 120 TSPISCTSSD FTNQTFVSRS SGRAESNNIY SMLQQDMGST NKLNYRPEFI GLDSSQIQKD 180 WSTGTNTTSP PKDFSDVSAD VVDVSINGFK PNIIQQDLSG LDQASSGNCM VTSQASSAGF 240 PAVSAPFGYT SATLLQNLFE GETDNTHQQS YCNNYSSSGA NYGSSSIWPR FSPLILGSRP 300 SPPRPLKQQQ QQPPGALHFT NNTPFWNASS PGLPNDGVFP STTPPLPPPP QQLRYVSQKF 360 EEKPKCNRLI TSAKANSNED VHDSGSVTKI SSSSNGSDQP VLKRPRIETP SPLPTFKVRK 420 EKLGDRITAL QQLVSPFGKT DTASVLHEAI EYIKFLHDQV SGLSTPYMKN NNGAPIPVRQ 480 QGSVNKLKDH KDESSKPDLK SRGLCLVPIS STFPVANETT AEFWAPTSSF GGTFIR

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MAEEFQIQGG ICGGNWWGSS RSMFTAAASP CSFGSFGWPS HDMLDAKAAG AARSSSSSGE  60
ETDHNVFQEV VHDQDDDNHD HHNNIDQKPH LQITADNSPV TGSANILIDS TLQMMGFGLL  120
TSPISCTSSD FTNQTFVSRS SGRAESNNIY SMLQQDMGST NKLNYRPEFI GLDSSQIQKD  180
WSTGTNTTSP PKDFSDVSAD VVDVSINGFK PNIIQQDLSG LDQASSGNCM VTSQASSAGF  240
PAVSAPFGYT SATLLQNLFE GETDNTHQQS YCNNYSSSGA NYGSSSIWPR FSPLILGSRP  300
SPPRPLKQQQ QQPPGALHFT NNTPFWNASS PGLPNDGVFP STTPPLPPPP QQLRYVSQKF  360
EEKPKCNRLI TSAKANSNED VHDSGSVTKI SSSSNGSDQP VLKRPRIETP SPLPTFKVRK  420
EKLGDRITAL QQLVSPFGKT DTASVLHEAI EYIKFLHDQV SGLSTPYMKN NNGAPIPVRQ  480
QGSVNKLKDH KDESSKPDLK SRGLCLVPIS STFPVANETT AEFWAPTSSF GGTFIR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.1	3e-51	bHLH family protein