PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON35833.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 202aa    MW: 23101.7 Da    PI: 6.9537
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON35833.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.26.3e-134184755
                HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 +ErrRR+++N+++  Lr l+P+      + + Ka+i+  Av YIk+Lq
  PON35833.1 41 HAERRRREKLNDKLLALRGLVPNI-----TNMKKATIVDDAVTYIKQLQ 84
                79*********************6.....5799***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MDQFITSSGL EELCIREKGR TGRKRLEKDR NGSSFKSKNL HAERRRREKL NDKLLALRGL  60
VPNITNMKKA TIVDDAVTYI KQLQQTVDNL QDQLLGIEAS SPEGTELKKE EITAEEEEHW  120
IQPDITVTQL HENKLWIKVI FKKKPGGFTK LMEVLSDLGF ELTDTSLTTH NGLLLVTLCL  180
QGFSRELLTV EEIKEVLLKM VN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14348ERRRRE
24449RRRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.13e-40bHLH family protein