PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON35869.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 326aa MW: 37452.6 Da PI: 7.7375

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON35869.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.2	1.4e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++++G g+W+ ++++ g+ R++k+c+ rw++yl PON35869.1 14 RGLWSPEEDEKLIRCINMHGYGCWSNVPEKAGLQRCGKSCRFRWLNYL 61 788*******************************************97 PP
2	Myb_DNA-binding	49.5	1e-15	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T+eE++l++ ++ G+ W+ I+++++ gRt++++k++w+++ PON35869.1 67 RGRFTQEEEKLIISLHGAIGNS-WAHISKYLP-GRTDNEIKNYWNSW 111 89****************99.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MGHHYCCKER KVKRGLWSPE EDEKLIRCIN MHGYGCWSNV PEKAGLQRCG KSCRFRWLNY 60 LRPDIKRGRF TQEEEKLIIS LHGAIGNSWA HISKYLPGRT DNEIKNYWNS WIKKKLYQKP 120 SSTITAISST STIEQYEYNS QMGFGSSQSE CLQSQHMTST NAPLPMVEDT TSLLCRSSSS 180 PSKHFITGLN SSTAGTWTHN TDHNNKDNHQ HYYQVQALYN NNNNNNNNNN NNNEIPPATT 240 SFTITPSCLD TDYQQSLIRI EENLVPAGAI KSHENCGTNM INDANQQLMI INSDDQLVNY 300 PYNNGNLQLH QHYHSKFPEC FWGQLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63910.1	6e-71	MYB family protein