PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON36503.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Protein Properties

Length: 359aa MW: 40456.1 Da PI: 10.2508

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON36503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.3	2.8e-18	151	240	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 f+k +++s+v + +l lp kf+e+h ++ +++ le+e+g+++e + +k+++ l++GW+ F+ +++L++gD +vF+l++ ++f ++ ++r PON36503.1 151 FVKSMVRSHVYSCFWLGLPSKFCEDHLP--KSVVDMELENEDGKEYEAIY--IGKRSG--LSGGWRAFALDHKLDDGDALVFELIEPTRF--KIYIVR 240 89**********************42..35689***********..555544..9*********************987777..777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MTFNGDSNIY EEVRKQRLEE NKKRFEDLGI AKISKSLADL ANSEKKSPKR LLPKPKSKST 60 CIVEPRRSSR ARNPVQSYCD EVFLDLPSTR KRSRSSSSSW GSGLSIEVVE AFSYLARPLE 120 EVKVASYEER RAALKAAEEL QSNLKSGNPS FVKSMVRSHV YSCFWLGLPS KFCEDHLPKS 180 VVDMELENED GKEYEAIYIG KRSGLSGGWR AFALDHKLDD GDALVFELIE PTRFKIYIVR 240 ASMLSSGSNM VTKKDTTEAE EKKYKVTMKL ASQSKQQKKS KNVKSRKLPT KCLLDGEVKQ 300 DVSPAKTRGF ISKRVKKEGG QSEEASETNE AASVQESSKF TSRKSRRKLT PKSSRHSLV

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MTFNGDSNIY EEVRKQRLEE NKKRFEDLGI AKISKSLADL ANSEKKSPKR LLPKPKSKST  60
CIVEPRRSSR ARNPVQSYCD EVFLDLPSTR KRSRSSSSSW GSGLSIEVVE AFSYLARPLE  120
EVKVASYEER RAALKAAEEL QSNLKSGNPS FVKSMVRSHV YSCFWLGLPS KFCEDHLPKS  180
VVDMELENED GKEYEAIYIG KRSGLSGGWR AFALDHKLDD GDALVFELIE PTRFKIYIVR  240
ASMLSSGSNM VTKKDTTEAE EKKYKVTMKL ASQSKQQKKS KNVKSRKLPT KCLLDGEVKQ  300
DVSPAKTRGF ISKRVKKEGG QSEEASETNE AASVQESSKF TSRKSRRKLT PKSSRHSLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58280.1	1e-59	B3 family protein