PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON36508.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 477aa    MW: 54602.9 Da    PI: 6.7549
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON36508.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS290.35.2e-89804751374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lLl  A  ++++d+  a + L++l + +s +gd++qR++ay++ +Laa+l++  s  ++ +  ++t+    +ee+ a+  ++ vsP+++f+h+taN
  PON36508.1  80 LIQLLLITASSINENDTVSALENLKELYKGVSLNGDSVQRVVAYYADGLAAKLLGRKSPFFDMIMKEPTA----EEEFLAFMDLYRVSPYYQFAHFTAN 174
                 6899***************************************************999999988887776....66777777899************** PP

        GRAS 100 qaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlvakrledle 190
                 qaI e++e+e     +++H+iDfdis+G+QWp+L+q+L++++  ++  sl+iTg+g+    s+eel+et++rL +fA+ + ++ f+f+ l+  r  +  
  PON36508.1 175 QAIIESFEKEeeknnRALHVIDFDISYGFQWPSLIQSLSEKAtgGNRISLQITGFGR----SQEELQETENRLLSFAKGFrNLVFDFQGLLRGRSYNNI 269
                 ********9977777788***********************9744455*********....9****************9758*******9887777777 PP

        GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErel 289
                 +++Lr k++E++aVnlv++l +l  ++ ++e+    +L+lv+s+sP vv++veqe +++  +Fl rf+e+l+y++a+fdsl+  lp es er ++E+  
  PON36508.1 270 INNLRKKRNETVAVNLVFHLNTLE-KTSKMEE----TLNLVQSISPSVVILVEQEGSRSPRNFLSRFMESLHYFAAMFDSLDDCLPLESAERLSIEKNH 363
                 ********************9996.5555555....9************************************************************** PP

        GRAS 290 lgreivnvva...........cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkv......ksdg........yrveee.sgslv.lg 361
                 lg+ei+ ++                +r  + e+le+W++r+e+ GF+ v +s+k + qaklll++       ++dg        +rv e+ +g ++ lg
  PON36508.1 364 LGKEIKTMLNygfdhhdhgdhDDDHNRCPKYERLETWKARMESHGFGGVIISSKSVIQAKLLLKMRthycplQFDGdnsnggagFRVFERdEGRAIsLG 462
                 *********733222221111223446677899******************************9852222221222222223336665444666667** PP

        GRAS 362 WkdrpLvsvSaWr 374
                 W++r L+++S+W+
  PON36508.1 463 WQNRYLLTASMWQ 475
                 ************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    
MEAINCDEEK LLNLSLEIVS DSGGERKRKR KSRHNVGTSY EGCTEGKIFR LLQMREQMLK  60
LDHKRSKATT IEDGSNGLRL IQLLLITASS INENDTVSAL ENLKELYKGV SLNGDSVQRV  120
VAYYADGLAA KLLGRKSPFF DMIMKEPTAE EEFLAFMDLY RVSPYYQFAH FTANQAIIES  180
FEKEEEKNNR ALHVIDFDIS YGFQWPSLIQ SLSEKATGGN RISLQITGFG RSQEELQETE  240
NRLLSFAKGF RNLVFDFQGL LRGRSYNNII NNLRKKRNET VAVNLVFHLN TLEKTSKMEE  300
TLNLVQSISP SVVILVEQEG SRSPRNFLSR FMESLHYFAA MFDSLDDCLP LESAERLSIE  360
KNHLGKEIKT MLNYGFDHHD HGDHDDDHNR CPKYERLETW KARMESHGFG GVIISSKSVI  420
QAKLLLKMRT HYCPLQFDGD NSNGGAGFRV FERDEGRAIS LGWQNRYLLT ASMWQCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12631RKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.15e-52GRAS family protein